Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824358.1_cds_XP_016501853.1_15555
CDS Infomation

[gene=LOC107820155] [db_xref=GeneID:107820155] [protein=UPF0676 protein C1494.01-like isoform X1] [protein_id=XP_016501853.1] [location=complement(join(6809..7433,8434..8487,9012..9091,9724..9826,9952..10010,10263..10369,10590..10711,11023..11074,11224..11304,16858..17050,17384..17461))] [gbkey=CDS]
Sequence

ATGGATGGAGCTCTGCAACTTCCGATGGTTGATCTTAGCTCTACAGATCGCACCTTACTC
GCTGATTCACTCCGCAAGGCATGCGTTGAGAATGGATTCTTTTACCTGATAAATCATGGG
GTAGAAGAAGAGTTGATTCAACGAGTTTTCGAAGGGAGCAGAAGGTTTTTTGGTCTCTCA
CTTGAAGAAAAGATGAAGCTGCTTCGTCAGAATCATAGAGGTTACTCCCCCCTTTACTCT
GAGAAGCTTAATTCTACTGACAATCCCAAAGGTGACCCAAAAGAAAGCATCTATTTTGGA
GCACCTGAAGACATGTCACCCTATGGTAATCTAAATCAGTGGCCTTCCCAAGAAATTCTG
CCATGTTGGAGATCTACGATGGAAGAATACTACCGAAGAATTCTGTGGGTTGGGAAAAGA
GTAGTTTCACTCATGGCTGTAGCGCTAAATGTGGATGAAGATTTCTTTGAGAAAGTTGGT
GCATTCGATCCACCCACTGCTCTTCTTCGCCCCCTGCATTATCCAGTCGCAGGTGAGATA
GACTCTTCTGATAAACATATGCATGGCGCTGGAGCTCATACAGATTGTGGAATGATTACT
ATCCTAGTGACTGATGGTGTTCCTGGACTTCAGGTTTGCAGGGATAAGTTACAGAAACCA
CAGATTTGGGAGGATGTGCATCATCTCAAAGGGGCTCTCATTGTTAATATTGGAGATATG
ATGGAAAGGTGGACAAATTGCTTGTTTAAGTCAACATTGCACAGAGTGACACAGCCAACA
CAGGATCGATACTCGGTGGCTATGTTTTTTGATCCAAGTCCAGATTGTGTTGTGGAATGC
TTGAAGAGTTGTTGTAATGAGTCTTCTCCCCCTAGTTCGTGCGGCAGACTACCTAAAGGA
GACCTACAAAGTTACTTATGGCGACCAGTGACTTCAAGACTAGGAAAACACGTCTCAGTT
GCAATAGTCATGGACCCTTGTATTATGGCTCTTCTCCTTCCAGTGGTGTTGATGTTTTCT
TCTACAGCTTTTGCCGCAATTCGTGCTCCATCCTCTCTTTGGCATCGTCATCTAGGCCAT
CCAAGCTCCATAGTTTTAGATTATTTAGTTCGAAATAATAAACTGTATTGTTATTCTTTC
AAGCGTTTTGATTCATTATGTATTGCTTGTCAGCTTGCCAAGCACCAAAAATCGCCATTC
AATAAATCAAGTTCCTTTACTTCTTCTTCTCCATTTGAATTAATACATAGTGATATATGG
ACTTCTCACATCCCATCCTTTACTGGATTTCGCTACTATATTCTTTTTCATGATGATTTT
ACCAAGTTTTTCTGGGTATTTCCTCTGCGACAAAAGTCTAAGGCTTTCACTATGTTTAAG
AAATTTTACGCCTTCATTTCAACTCAGTTTTCCACTAAAATAAAAAAGTTACAATGCGAT
GAGGCTGCTGAATATGTTAAACTTAAATTATTTCGTTCTTTTCTCAATGATAATGGAATT
TCTCTTCGAATCTCTTGCCCTCATACCCACCAACAAAATGGAAAGGCTGAGTGA

Peptide Sequence

PEP ID

XP_016501853.1
PEP Infomation

PREDICTED: UPF0676 protein C1494.01-like isoform X1 [Nicotiana tabacum]
Sequence

MDGALQLPMVDLSSTDRTLLADSLRKACVENGFFYLINHGVEEELIQRVFEGSRRFFGLS
LEEKMKLLRQNHRGYSPLYSEKLNSTDNPKGDPKESIYFGAPEDMSPYGNLNQWPSQEIL
PCWRSTMEEYYRRILWVGKRVVSLMAVALNVDEDFFEKVGAFDPPTALLRPLHYPVAGEI
DSSDKHMHGAGAHTDCGMITILVTDGVPGLQVCRDKLQKPQIWEDVHHLKGALIVNIGDM
MERWTNCLFKSTLHRVTQPTQDRYSVAMFFDPSPDCVVECLKSCCNESSPPSSCGRLPKG
DLQSYLWRPVTSRLGKHVSVAIVMDPCIMALLLPVVLMFSSTAFAAIRAPSSLWHRHLGH
PSSIVLDYLVRNNKLYCYSFKRFDSLCIACQLAKHQKSPFNKSSSFTSSSPFELIHSDIW
TSHIPSFTGFRYYILFHDDFTKFFWVFPLRQKSKAFTMFKKFYAFISTQFSTKIKKLQCD
EAAEYVKLKLFRSFLNDNGISLRISCPHTHQQNGKAE

Transcript Sequence

Gene sequence data has not been registered.